EoN.EBCM_pref_mix_from_graph¶

EoN.EBCM_pref_mix_from_graph(G, tau, gamma, rho=None, tmin=0, tmax=100, tcount=1001, return_full_data=False)[source]¶

Takes a given graph, finds degree correlations, and calls EBCM_pref_mix

I anticipate eventually adding an option so that the initial condition is not uniformly distributed. So could give rho_k

G networkx Graph: The contact network
tau positive float: transmission rate
gamma positive float: recovery rate
rho positive float (default None): initial proportion infected. Defaults to 1/N.
tmin number (default 0): minimum time
tmax number (default 100): maximum time
tcount integer (default 1001): number of time points for data (including end points)
return_full_data boolean (default False): whether to return theta or not

if return_full_data == False:: returns t, S, I, R, all numpy arrays
if …== True: returns t, S, I, R and theta, where theta[k] is a numpy array giving theta for degree k