EoN.SIS_super_compact_pairwise¶
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EoN.SIS_super_compact_pairwise(S0, I0, SS0, SI0, II0, tau, gamma, k_ave, ksquare_ave, kcube_ave, tmin=0, tmax=100, tcount=1001, return_full_data=False)[source]¶ Encodes system (5.20) of Kiss, Miller, & Simon. Please cite the book if using this algorithm.
Arguments: - S0 number
- initial number susceptible
- I0 number
- initial number infected
- SS0 number
- initial number of susceptible-susceptible edges
- SI0 number
- initial number of susceptible-infected edges
- II0 number
- initial number of infected-infected edges.
- tau positive float
- transmission rate
- gamma number
- recovery rate
- k_ave number
- average value of degree k
- ksquare_ave number
- average value of k**2
- kcube_ave number
- average value of k**3
- tmin number (default 0)
- minimum report time
- tmax number (default 100)
- maximum report time
- tcount integer (default 1001)
- number of reports
- return_full_data boolean
- tells whether to just return times, S, I, R or all calculated data.
Returns: - if return_full_data is True
- returns times, S, I, SS, SI, II
- if return_full_data is False
- returns times, S, I
SAMPLE USE: import networkx as nx import EoN